SNP Profiles matching SCA 19

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	GG	TT	CC	GT	CC	AA	CG	AG	CT	AA	GG	AA	CC	CT
1._SCA_19	GG	TT	CC	GT	CC	AA	CG	AG	CT	AA	GG	AA	CC	CT
2._SCA_19	GG	TT	CC	GT	CC	AA	CG	AG	CT	AA	GG	AA	CC	CT
3._GC-03-004-1-04	GG	TT	CC	GT	CC	AA	CG	AG	CT	AA	GG	AA	CC	CT
4._GC-03-004-1-04	GG	TT	CC	GT	CC	AA	CG	AG	CT	AA	GG	AA	CC	CT
5._GC-03-004-1-04	GG	TT	CC	GT	CC	AA	CG	AG	CT	AA	GG	AA	CC	CT
6._POUND_25_/A	GG	TT	CC	TT	CC	AC	CG	GG	CT	AA	GG	AA	CC	CT

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	GG	GG	AA	CC	AA	GT	GG	CT	CC	GG	AA	CT	AG	CC
1._SCA_19	GG	GG	AA	CC	AA	GT	GG	CT	CC	GG	AA	CT	AG	CC
2._SCA_19	GG	GG	AA	CC	AA	GT	GG	CT	CC	GG	AA	CT	AG	CC
3._GC-03-004-1-04	GG	GG	AA	CC	AA	GT	GG	CT	CC	GG	AA	CT	AG	CC
4._GC-03-004-1-04	GG	GG	AA	CC	AA	GT	GG	CT	CC	GG	AA	CT	AG	CC
5._GC-03-004-1-04	GG	GG	AA	CC	AA	GT	GG	CT	CC	GG	AA	CT	AG	CC
6._POUND_25_/A	GG	GG	AA	CC	AA	GT	CG	CC	CC	GG	AA	TT	AG	CC

	29	30	31	32	33	34	35	36	37	38	39	40
_Input profile	GG	AA	CC	CC	GT	TT	CC	TT	TT	CG	AA	CC	X_X	X_X
1._SCA_19	GG	AA	CC	CC	GT	TT	CC	TT	TT	CG	AA	CC	X_X	X_X
2._SCA_19	GG	AA	CC	CC	GT	TT	CC	TT	TT	CG	AA	CC	X_X	X_X
3._GC-03-004-1-04	GG	AA	CC	CC	GT	TT	CC	TT	TT	CG	AA	CC	X_X	X_X
4._GC-03-004-1-04	GG	AA	CC	CC	GT	TT	CC	TT	TT	CG	AA	CC	X_X	X_X
5._GC-03-004-1-04	GG	AA	CC	CC	GT	TT	CC	TT	TT	CG	AA	CC	X_X	X_X
6._POUND_25_/A	GG	AA	CC	CC	GT	TT	AC	TT	TT	CG	AA	CC	X_X	X_X

Input profile: SCA_19

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Mars Center for Cocoa Science, Brazil

Location: 3104 16

Dapeng Zhang, 2016

1._SCA_19

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 3104 9 > FP

Dapeng Zhang, 2016

2._SCA_19

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 3104 8

Dapeng Zhang, 2016

3._SCA_19 GC-03-004-1-04

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 8

Notes: 8

Mars, 2018

4._SCA_19 GC-03-004-1-04

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 9

Notes: 9 > FP1

Mars, 2018

5._SCA_19 GC-03-004-1-04

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 16

Notes: 16

Mars, 2018

6._POUND_25_/A

91.3 %
40 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 6B F452 T9

Dapeng Zhang, 2016

Key to SNP Markers

1	TcSNP25	2	TcSNP32	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP193	7	TcSNP226	8	TcSNP230	9	TcSNP242	10	TcSNP372
11	TcSNP429	12	TcSNP469	13	TcSNP529	14	TcSNP534	15	TcSNP560
16	TcSNP577	17	TcSNP591	18	TcSNP619	19	TcSNP645	20	TcSNP723
21	TcSNP872	22	TcSNP891	23	TcSNP917	24	TcSNP929	25	TcSNP953
26	TcSNP994	27	TcSNP998	28	TcSNP1060	29	TcSNP1062	30	TcSNP1075
31	TcSNP1144	32	TcSNP1165	33	TcSNP1253	34	TcSNP1270	35	TcSNP1350
36	TcSNP1414	37	TcSNP1442	38	TcSNP1458	39	TcSNP1484	40	TcSNP1520

SNP Profiles matching SCA 19

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Input profile: SCA_19

1._SCA_19

identical 40 shared markers

2._SCA_19

identical 40 shared markers

3._SCA_19 GC-03-004-1-04

identical 40 shared markers

4._SCA_19 GC-03-004-1-04

identical 40 shared markers

5._SCA_19 GC-03-004-1-04

identical 40 shared markers

6._POUND_25_/A

91.3 % 40 shared markers

identical
40 shared markers

identical
40 shared markers

identical
40 shared markers

identical
40 shared markers

identical
40 shared markers

91.3 %
40 shared markers